CDS

Accession Number TCMCG043C42037
gbkey CDS
Protein Id XP_022883444.1
Location complement(join(29407040..29407314,29407467..29408403,29413810..29413986,29414354..29414656,29414734..29414874,29415149..29415400,29416129..29416269,29430556..29430828,29430983..29431110,29431994..29432187,29432341..29432393))
Gene LOC111400253
GeneID 111400253
Organism Olea europaea var. sylvestris

Protein

Length 957aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA417827
db_source XM_023027676.1
Definition chromodomain-helicase-DNA-binding protein 3-like isoform X1 [Olea europaea var. sylvestris]

EGGNOG-MAPPER Annotation

COG_category K
Description Chromo (CHRromatin Organisation MOdifier) domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K11642        [VIEW IN KEGG]
ko:K11643        [VIEW IN KEGG]
ko:K20091        [VIEW IN KEGG]
EC 3.6.4.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko05165        [VIEW IN KEGG]
ko05203        [VIEW IN KEGG]
map05165        [VIEW IN KEGG]
map05203        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006342        [VIEW IN EMBL-EBI]
GO:0006344        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0042803        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045814        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0046983        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGTGGTCCCAATAACGTGTGTGTCATCTGCAATCAAGGTGGCGAACTCTTGTGCTGCATTGGAAATGGATGCAAGAGATGTTACCATCTGTCGTGTCTAGATCCTCCTCTAAGTGATGTTCCAGCAGGAGTTTGGCACTGTTTATGGTGTGTGAAGAAGAAGGTAGAATTAGGTGCCCATTCAGTGTCACTAGGAGTAGAGTCAATTTGGAATGCTAGAGAAGTGGAGATATCGAATGCTGAAGGAGTGCGAAGGCAGAAGCAGTATCTTGCTAAATACCATGGCCTTGCTCACATCCACAACCATTGGTTGCCTGAGAAACAATTGCTTCCACAAAATCTTCTTCTTGCAGAATTTAATTCAAAACATCAGGTGGTGAGATGGAATGCAGAATGGACAGTGCCGCACCGTCTGTTGAAGAAAAGATTAATTATCTTCTCTAGACTGCAAAATAAGCATCAGATCATGCCTTCCATTGATAGTTCAGATTGCCTGTGTGAATGGCTTGTGAAATGGTGTGGTCTTGGTTACGAGCATGCTTCATGGGAGTTAGATAATTCTTACACTCTAAGGTCCCCTCGAGGTCAGAACCTCGTGAAGGATTATGAAATTCGTCTTCAGAAGGCAAAGAGAACAGTTGACGAGAGTCGAAAAGGATCATATATCAAGCTCTCAAAGCTTCCAGCTGGAGGATCACTTCCGAAGAATCAGAATCTATTGAAACATGTGAACAAGCTGCGCTGGTACTGGTACAACAGCCAGAACACTGTTGTTTTTGATAATCAGGAGTGGGCAATGACTGTGATTGCGTTTGTTCTCTCTTTGACTGAGGTCTGTCAGCCTTTCCTCATTATTGTGGCTTCAGATGCAATTTCTCAATGGGAAGCTGAGTTCACGCGACTGTCCCCTTCCATTGCTGTCACAATTTATAGCGGAAGCAGGGATACGAGGAAAACTATTAGGACATTAGAATTTTTTGAGGAAGGGGATTGCATGATGCTCCAAGTGCTCTTGTCTTCTCCAGAAGCCGTTTTTGAGGACTTGGACATATTGAGATGCATAAAATGGGAAGCAGTTATAGTTCATGAGTGCCAGCACTCTGGGATAGAAAATCCTTGGGAACAAATTAAAATTCTCCCTACAAATTCTAGAATACTTCTTTTCAATGGTCAAATAAAGGATACTGTATCTGAATATCTTAATCTACTATCATTGCTTGATTCTTGTGATGATCTGGGAGGCTTCAGGTCCGACACAATTGATAATCTTGGTAAATTAAAAGAGAGGTTAGCACGTTTTATTGCATATGGCAGCATTCCTGAGTTATCCCAGTTTGTAGAGTATTGGGTTCCTGTTCCAATGTCAAATTGCCAGCTTGAGCAGTACTGTGCTGCACTTCTTACGAATTCTATTCCTCTTTGTTCTTGCTCCAAAAGCGACCCTGTTGGTGCCTTCCGTGATATTCTTTTTACTGTCCGAAAGTGTTGTGATCATCCCTATCTCGTGAACTCCTCCTTGCAAGAAAGCTTGATAGCTGAGGGGTGCCTGGCAACTGAACTTTTAGATACTGGAATAAAAGCATGTGGCAAATTACAGCTTCTTGACATGATACTTTCAGAGATAAAAAATCAAGGACAACAAGTGGTCATACTTTGTCAGCAGACAGTTGTTGGCGTAGGAAGGGCATCAATCGGAGATATATTGGATGATTTTCTGCGTCAAAGATTTGGTCCAAATTTTTACGAACGTATTGATGCTAGAGTTGTCCCATCCAAGAAGCATGCTGCTGTGAATCGTTTTAACAAGAAGGAAAATGGGCAATTTGTGTTCTTACTAGAAAATCGTGCTTGTTCTTCAAGCATTAAGCTATCATCAGTTAATATTGTTATCGTATATGATAGTGAATGGAATCCAGCAAATGATTTGAGGGCACTACAAAAGATATCCTTCAATTCAAAATTAGAGCAGATCAAAGTTTTTCGGTTATATTCGTCCTGTACTGTTGAAGAAAAGGCCCTACTTCTAGCAACGCAGGTTCTTAATCTTGATAACAATCTGCATAACTTGAGTAGGACCACTAGCGACACACTGCTAATGTGGGGTGCTTCATATTTATTTAGCAAATTGGATGATTATTATGCTGACAGAAGCCCTACATCTGCTTTAAACATTTCCTCAGAGCAATTGCTTTTGAATGACACTACCAAGGAGCTACTGACCATACTTTCTGAAACCTCTGAATATAATGGTTCAGGTTGTATCATTTCAAAAGTTCAACTGGATGTTGGACGTTATAGTATAAATCTTCCCCTACTCGGGGAGGGAAAATTCCAGTTGAAAGATGGAGAAGAGGCTCATGTTTTCTGGAGAAAGCTTTTGGAGGGTAGAAATCCACAGTGGAAGTATTCCTGTGGGTCAACTCCACGTAATAGGAAAAGAGTTCAATTCTTTGATGAATCGTCTGGGAACCCTGACACTGGTAGTGATGAAGTTAGAAAAAAACATAGGAAGGCAGTCAATGAAAATGTAGATCCAGCATCGATTCAAGTTGAACCCAAAGGGCATCAACTGACTCAAGCTGCTGGTTGTAAAGGAGGGTCTTCTACAGCAGTATCCACCACCCAGTCCCAATCTGTGGACGAATCAACTTCTCATCAAACTGACAATGTTAATCCAGAAAGCAACTCAAATTTCATATTTGGTCAGAGCTCTTTTGATCCTGGAGTCCACGTGGACAAGTCCCAGGAAATAGTAACATCATCCAATGAGCAGAAGAGCCTCCATAGCATAATAAAAGGAGAGATGGCGAGACTATGCCAAATTCTTAAAGTTTCGGTACCATCTCTTATTTCCCTTATTTATGATCATTGA
Protein:  
MGGPNNVCVICNQGGELLCCIGNGCKRCYHLSCLDPPLSDVPAGVWHCLWCVKKKVELGAHSVSLGVESIWNAREVEISNAEGVRRQKQYLAKYHGLAHIHNHWLPEKQLLPQNLLLAEFNSKHQVVRWNAEWTVPHRLLKKRLIIFSRLQNKHQIMPSIDSSDCLCEWLVKWCGLGYEHASWELDNSYTLRSPRGQNLVKDYEIRLQKAKRTVDESRKGSYIKLSKLPAGGSLPKNQNLLKHVNKLRWYWYNSQNTVVFDNQEWAMTVIAFVLSLTEVCQPFLIIVASDAISQWEAEFTRLSPSIAVTIYSGSRDTRKTIRTLEFFEEGDCMMLQVLLSSPEAVFEDLDILRCIKWEAVIVHECQHSGIENPWEQIKILPTNSRILLFNGQIKDTVSEYLNLLSLLDSCDDLGGFRSDTIDNLGKLKERLARFIAYGSIPELSQFVEYWVPVPMSNCQLEQYCAALLTNSIPLCSCSKSDPVGAFRDILFTVRKCCDHPYLVNSSLQESLIAEGCLATELLDTGIKACGKLQLLDMILSEIKNQGQQVVILCQQTVVGVGRASIGDILDDFLRQRFGPNFYERIDARVVPSKKHAAVNRFNKKENGQFVFLLENRACSSSIKLSSVNIVIVYDSEWNPANDLRALQKISFNSKLEQIKVFRLYSSCTVEEKALLLATQVLNLDNNLHNLSRTTSDTLLMWGASYLFSKLDDYYADRSPTSALNISSEQLLLNDTTKELLTILSETSEYNGSGCIISKVQLDVGRYSINLPLLGEGKFQLKDGEEAHVFWRKLLEGRNPQWKYSCGSTPRNRKRVQFFDESSGNPDTGSDEVRKKHRKAVNENVDPASIQVEPKGHQLTQAAGCKGGSSTAVSTTQSQSVDESTSHQTDNVNPESNSNFIFGQSSFDPGVHVDKSQEIVTSSNEQKSLHSIIKGEMARLCQILKVSVPSLISLIYDH